| 1. |  | AC Sparta Praha | 1404 | 876 | 293 | 235 | 2721 | 1278 | +1443 | 2903 |
| 2. |  | SK Slavia Praha | 1404 | 861 | 319 | 224 | 2680 | 1141 | +1539 | 2886 |
| 3. |  | FC Viktoria Plzeň | 1284 | 695 | 281 | 308 | 2150 | 1335 | +815 | 2354 |
| 4. |  | FC Slovan Liberec | 1421 | 578 | 382 | 461 | 1928 | 1645 | +283 | 2105 |
| 5. |  | FK Jablonec | 1374 | 525 | 393 | 456 | 1855 | 1687 | +168 | 1968 |
| 6. |  | FC Baník Ostrava | 1411 | 523 | 382 | 506 | 1928 | 1782 | +146 | 1937 |
| 7. |  | SK Sigma Olomouc | 1326 | 485 | 375 | 466 | 1711 | 1625 | +86 | 1816 |
| 8. |  | FK Teplice | 1302 | 430 | 358 | 514 | 1531 | 1761 | -230 | 1648 |
| 9. |  | FK Mladá Boleslav | 1103 | 413 | 284 | 406 | 1639 | 1578 | +61 | 1523 |
| 10. |  | 1.FC Slovácko | 1128 | 396 | 294 | 438 | 1318 | 1457 | -139 | 1482 |
| 11. |  | Bohemians Praha 1905 | 1130 | 333 | 318 | 479 | 1227 | 1595 | -368 | 1309 |
| 12. |  | SK Dynamo České Budějovice | 1056 | 278 | 257 | 521 | 1121 | 1760 | -639 | 1080 |
| 13. |  | FC Zbrojovka Brno | 854 | 271 | 222 | 361 | 995 | 1189 | -194 | 1025 |
| 14. |  | FC Hradec Králové | 866 | 263 | 236 | 367 | 909 | 1160 | -251 | 1016 |
| 15. |  | FC Zlín | 938 | 247 | 254 | 437 | 984 | 1433 | -449 | 985 |
| 16. |  | FK VIAGEM Příbram | 770 | 213 | 192 | 365 | 780 | 1168 | -388 | 831 |
| 17. |  | MFK Karviná | 604 | 142 | 152 | 310 | 659 | 989 | -330 | 578 |
| 18. |  | FK Viktoria Žižkov | 420 | 144 | 106 | 170 | 478 | 539 | -61 | 526 |
| 19. |  | FK Pardubice | 484 | 127 | 106 | 251 | 506 | 810 | -304 | 487 |
| 20. |  | FK Dukla Praha | 460 | 107 | 132 | 221 | 474 | 721 | -247 | 452 |
| 21. |  | Slezský FC Opava | 440 | 105 | 114 | 221 | 427 | 686 | -259 | 429 |
| 22. |  | FK Drnovice | 300 | 114 | 67 | 119 | 392 | 398 | -6 | 396 |
| 23. |  | FK Chmel Blšany | 240 | 67 | 63 | 110 | 255 | 350 | -95 | 264 |
| 24. |  | FC Vysočina Jihlava | 210 | 55 | 61 | 94 | 221 | 315 | -94 | 226 |
| 25. |  | SK Kladno | 120 | 28 | 30 | 62 | 99 | 173 | -74 | 114 |
| 26. |  | FC Union Cheb | 90 | 29 | 26 | 35 | 95 | 121 | -26 | 100 |
| 27. |  | FK SIAD Most | 90 | 19 | 30 | 41 | 96 | 140 | -44 | 87 |
| 28. |  | FC Karviná | 60 | 12 | 12 | 36 | 53 | 105 | -52 | 48 |
| 29. |  | FK Bohemians Praha | 60 | 14 | 8 | 38 | 60 | 111 | -51 | 50 |
| 30. |  | 1.SC Znojmo FK | 30 | 6 | 9 | 15 | 32 | 49 | -17 | 27 |
| 31. |  | FK Ústí nad Labem | 30 | 4 | 7 | 19 | 22 | 67 | -45 | 19 |
| 32. |  | FC JOKO Slovácká Slavia Uherské Hradiště | 30 | 3 | 8 | 19 | 19 | 65 | -46 | 17 |
| 33. |  | MFK Vítkovice | 30 | 3 | 7 | 20 | 22 | 64 | -42 | 13 |
| 34. |  | FK ŠVARC Benešov | 30 | 3 | 3 | 24 | 23 | 78 | -55 | 12 |
| 35. |  | AFK Atl. Lázně Bohdaneč | 30 | 2 | 5 | 23 | 18 | 61 | -43 | 11 |
