| 1. |  | AC Sparta Praha | 1154 | 711 | 248 | 195 | 2211 | 1015 | +1196 | 2363 |
| 2. |  | SK Slavia Praha | 1154 | 668 | 276 | 210 | 2141 | 985 | +1156 | 2264 |
| 3. |  | FC Viktoria Plzeň | 1034 | 542 | 235 | 257 | 1640 | 1060 | +580 | 1849 |
| 4. |  | FC Slovan Liberec | 1183 | 493 | 309 | 381 | 1575 | 1350 | +225 | 1777 |
| 5. |  | FK Jablonec | 1124 | 422 | 323 | 379 | 1499 | 1401 | +98 | 1589 |
| 6. |  | FC Baník Ostrava | 1161 | 408 | 334 | 419 | 1552 | 1483 | +69 | 1544 |
| 7. |  | SK Sigma Olomouc | 1082 | 397 | 317 | 368 | 1393 | 1285 | +108 | 1494 |
| 8. |  | FK Teplice | 1054 | 354 | 290 | 410 | 1268 | 1441 | -173 | 1352 |
| 9. |  | 1.FC Slovácko | 878 | 326 | 223 | 329 | 1062 | 1080 | -18 | 1201 |
| 10. |  | FK Mladá Boleslav | 816 | 319 | 211 | 286 | 1226 | 1119 | +107 | 1168 |
| 11. |  | Bohemians Praha 1905 | 882 | 265 | 241 | 376 | 984 | 1265 | -281 | 1028 |
| 12. |  | FC Zbrojovka Brno | 854 | 271 | 222 | 361 | 995 | 1189 | -194 | 1025 |
| 13. |  | SK Dynamo České Budějovice | 856 | 258 | 218 | 380 | 959 | 1308 | -349 | 981 |
| 14. |  | FC TRINITY Zlín | 788 | 216 | 206 | 366 | 806 | 1164 | -358 | 844 |
| 15. |  | FK VIAGEM Příbram | 770 | 213 | 192 | 365 | 780 | 1168 | -388 | 831 |
| 16. |  | FC Hradec Králové | 618 | 171 | 171 | 276 | 612 | 877 | -265 | 675 |
| 17. |  | FK Viktoria Žižkov | 420 | 144 | 106 | 170 | 478 | 539 | -61 | 526 |
| 18. |  | Slezský FC Opava | 440 | 105 | 114 | 221 | 427 | 686 | -259 | 429 |
| 19. |  | FK Drnovice | 300 | 114 | 67 | 119 | 392 | 398 | -6 | 396 |
| 20. |  | FK Dukla Praha | 310 | 82 | 83 | 145 | 355 | 492 | -137 | 328 |
| 21. |  | MFK Karviná | 360 | 67 | 101 | 192 | 361 | 563 | -202 | 302 |
| 22. |  | FK Chmel Blšany | 240 | 67 | 63 | 110 | 255 | 350 | -95 | 264 |
| 23. |  | FK Pardubice | 234 | 68 | 48 | 118 | 265 | 429 | -164 | 252 |
| 24. |  | FC Vysočina Jihlava | 210 | 55 | 61 | 94 | 221 | 315 | -94 | 226 |
| 25. |  | SK Kladno | 120 | 28 | 30 | 62 | 99 | 173 | -74 | 114 |
| 26. |  | FC Union Cheb | 90 | 29 | 26 | 35 | 95 | 121 | -26 | 100 |
| 27. |  | FK SIAD Most | 90 | 19 | 30 | 41 | 96 | 140 | -44 | 87 |
| 28. |  | FC Karviná | 60 | 12 | 12 | 36 | 53 | 105 | -52 | 48 |
| 29. |  | FK Bohemians Praha | 60 | 14 | 8 | 38 | 60 | 111 | -51 | 50 |
| 30. |  | 1.SC Znojmo FK | 30 | 6 | 9 | 15 | 32 | 49 | -17 | 27 |
| 31. |  | FK Ústí nad Labem | 30 | 4 | 7 | 19 | 22 | 67 | -45 | 19 |
| 32. |  | FC JOKO Slovácká Slavia Uherské Hradiště | 30 | 3 | 8 | 19 | 19 | 65 | -46 | 17 |
| 33. |  | MFK Vítkovice | 30 | 3 | 7 | 20 | 22 | 64 | -42 | 13 |
| 34. |  | FK ŠVARC Benešov | 30 | 3 | 3 | 24 | 23 | 78 | -55 | 12 |
| 35. |  | AFK Atl. Lázně Bohdaneč | 30 | 2 | 5 | 23 | 18 | 61 | -43 | 11 |
