| 1. |  | FC Slovan Liberec | 1199 | 497 | 315 | 387 | 1591 | 1370 | +221 | 1795 |
| 2. |  | FC Baník Ostrava | 1177 | 414 | 338 | 425 | 1570 | 1499 | +71 | 1566 |
| 3. |  | SK Slavia Praha | 1170 | 682 | 278 | 210 | 2173 | 993 | +1180 | 2308 |
| 4. |  | AC Sparta Praha | 1170 | 725 | 250 | 195 | 2259 | 1025 | +1234 | 2407 |
| 5. |  | FK Jablonec | 1140 | 422 | 333 | 385 | 1511 | 1427 | +84 | 1599 |
| 6. |  | SK Sigma Olomouc | 1098 | 409 | 317 | 372 | 1423 | 1301 | +122 | 1530 |
| 7. |  | FK Teplice | 1070 | 360 | 294 | 416 | 1282 | 1455 | -173 | 1374 |
| 8. |  | FC Viktoria Plzeň | 1048 | 552 | 237 | 259 | 1680 | 1074 | +606 | 1881 |
| 9. |  | Bohemians Praha 1905 | 898 | 271 | 243 | 384 | 996 | 1285 | -289 | 1048 |
| 10. |  | 1.FC Slovácko | 894 | 334 | 227 | 333 | 1080 | 1100 | -20 | 1229 |
| 11. |  | SK Dynamo České Budějovice | 872 | 262 | 218 | 392 | 981 | 1352 | -371 | 993 |
| 12. |  | FC Zbrojovka Brno | 854 | 271 | 222 | 361 | 995 | 1189 | -194 | 1025 |
| 13. |  | FK Mladá Boleslav | 830 | 325 | 215 | 290 | 1254 | 1139 | +115 | 1190 |
| 14. |  | FC Zlín | 804 | 218 | 208 | 378 | 818 | 1202 | -384 | 852 |
| 15. |  | FK VIAGEM Příbram | 770 | 213 | 192 | 365 | 780 | 1168 | -388 | 831 |
| 16. |  | FC Hradec Králové | 634 | 175 | 173 | 286 | 634 | 909 | -275 | 689 |
| 17. |  | Slezský FC Opava | 440 | 105 | 114 | 221 | 427 | 686 | -259 | 429 |
| 18. |  | FK Viktoria Žižkov | 420 | 144 | 106 | 170 | 478 | 539 | -61 | 526 |
| 19. |  | MFK Karviná | 376 | 69 | 103 | 204 | 381 | 599 | -218 | 310 |
| 20. |  | FK Dukla Praha | 310 | 82 | 83 | 145 | 355 | 492 | -137 | 328 |
| 21. |  | FK Drnovice | 300 | 114 | 67 | 119 | 392 | 398 | -6 | 396 |
| 22. |  | FK Pardubice | 250 | 72 | 50 | 128 | 275 | 449 | -174 | 266 |
| 23. |  | FK Chmel Blšany | 240 | 67 | 63 | 110 | 255 | 350 | -95 | 264 |
| 24. |  | FC Vysočina Jihlava | 210 | 55 | 61 | 94 | 221 | 315 | -94 | 226 |
| 25. |  | SK Kladno | 120 | 28 | 30 | 62 | 99 | 173 | -74 | 114 |
| 26. |  | FC Union Cheb | 90 | 29 | 26 | 35 | 95 | 121 | -26 | 100 |
| 27. |  | FK SIAD Most | 90 | 19 | 30 | 41 | 96 | 140 | -44 | 87 |
| 28. |  | FC Karviná | 60 | 12 | 12 | 36 | 53 | 105 | -52 | 48 |
| 29. |  | FK Bohemians Praha | 60 | 14 | 8 | 38 | 60 | 111 | -51 | 50 |
| 30. |  | MFK Vítkovice | 30 | 3 | 7 | 20 | 22 | 64 | -42 | 13 |
| 31. |  | 1.SC Znojmo FK | 30 | 6 | 9 | 15 | 32 | 49 | -17 | 27 |
| 32. |  | FK Ústí nad Labem | 30 | 4 | 7 | 19 | 22 | 67 | -45 | 19 |
| 33. |  | FC JOKO Slovácká Slavia Uherské Hradiště | 30 | 3 | 8 | 19 | 19 | 65 | -46 | 17 |
| 34. |  | FK ŠVARC Benešov | 30 | 3 | 3 | 24 | 23 | 78 | -55 | 12 |
| 35. |  | AFK Atl. Lázně Bohdaneč | 30 | 2 | 5 | 23 | 18 | 61 | -43 | 11 |
