| 1. |  | AC Sparta Praha | 1188 | 739 | 252 | 197 | 2295 | 1039 | +1256 | 2451 |
| 2. |  | SK Slavia Praha | 1186 | 692 | 282 | 212 | 2201 | 1007 | +1194 | 2342 |
| 3. |  | FC Viktoria Plzeň | 1066 | 560 | 239 | 267 | 1714 | 1108 | +606 | 1907 |
| 4. |  | FC Slovan Liberec | 1215 | 503 | 321 | 391 | 1621 | 1398 | +223 | 1819 |
| 5. |  | FK Jablonec | 1158 | 430 | 337 | 391 | 1535 | 1447 | +88 | 1627 |
| 6. |  | FC Baník Ostrava | 1193 | 422 | 340 | 431 | 1596 | 1513 | +83 | 1592 |
| 7. |  | SK Sigma Olomouc | 1116 | 413 | 325 | 378 | 1447 | 1325 | +122 | 1550 |
| 8. |  | FK Teplice | 1088 | 364 | 300 | 424 | 1298 | 1477 | -179 | 1392 |
| 9. |  | 1.FC Slovácko | 912 | 342 | 233 | 337 | 1104 | 1114 | -10 | 1259 |
| 10. |  | FK Mladá Boleslav | 848 | 335 | 215 | 298 | 1292 | 1175 | +117 | 1220 |
| 11. |  | Bohemians Praha 1905 | 914 | 277 | 247 | 390 | 1010 | 1303 | -293 | 1070 |
| 12. |  | FC Zbrojovka Brno | 854 | 271 | 222 | 361 | 995 | 1189 | -194 | 1025 |
| 13. |  | SK Dynamo České Budějovice | 888 | 264 | 220 | 404 | 989 | 1376 | -387 | 1001 |
| 14. |  | FC Zlín | 820 | 220 | 216 | 384 | 836 | 1238 | -402 | 866 |
| 15. |  | FK VIAGEM Příbram | 770 | 213 | 192 | 365 | 780 | 1168 | -388 | 831 |
| 16. |  | FC Hradec Králové | 650 | 179 | 181 | 290 | 646 | 923 | -277 | 709 |
| 17. |  | FK Viktoria Žižkov | 420 | 144 | 106 | 170 | 478 | 539 | -61 | 526 |
| 18. |  | Slezský FC Opava | 440 | 105 | 114 | 221 | 427 | 686 | -259 | 429 |
| 19. |  | FK Drnovice | 300 | 114 | 67 | 119 | 392 | 398 | -6 | 396 |
| 20. |  | FK Dukla Praha | 310 | 82 | 83 | 145 | 355 | 492 | -137 | 328 |
| 21. |  | MFK Karviná | 392 | 75 | 103 | 214 | 397 | 621 | -224 | 328 |
| 22. |  | FK Pardubice | 268 | 74 | 56 | 138 | 291 | 479 | -188 | 278 |
| 23. |  | FK Chmel Blšany | 240 | 67 | 63 | 110 | 255 | 350 | -95 | 264 |
| 24. |  | FC Vysočina Jihlava | 210 | 55 | 61 | 94 | 221 | 315 | -94 | 226 |
| 25. |  | SK Kladno | 120 | 28 | 30 | 62 | 99 | 173 | -74 | 114 |
| 26. |  | FC Union Cheb | 90 | 29 | 26 | 35 | 95 | 121 | -26 | 100 |
| 27. |  | FK SIAD Most | 90 | 19 | 30 | 41 | 96 | 140 | -44 | 87 |
| 28. |  | FC Karviná | 60 | 12 | 12 | 36 | 53 | 105 | -52 | 48 |
| 29. |  | FK Bohemians Praha | 60 | 14 | 8 | 38 | 60 | 111 | -51 | 50 |
| 30. |  | 1.SC Znojmo FK | 30 | 6 | 9 | 15 | 32 | 49 | -17 | 27 |
| 31. |  | FK Ústí nad Labem | 30 | 4 | 7 | 19 | 22 | 67 | -45 | 19 |
| 32. |  | FC JOKO Slovácká Slavia Uherské Hradiště | 30 | 3 | 8 | 19 | 19 | 65 | -46 | 17 |
| 33. |  | MFK Vítkovice | 30 | 3 | 7 | 20 | 22 | 64 | -42 | 13 |
| 34. |  | FK ŠVARC Benešov | 30 | 3 | 3 | 24 | 23 | 78 | -55 | 12 |
| 35. |  | AFK Atl. Lázně Bohdaneč | 30 | 2 | 5 | 23 | 18 | 61 | -43 | 11 |
